MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4087_ses-1_T1w.
  • Date and time: 2022-11-03, 18:29.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.3958416956204789
cnr3.2074488517263156
efc0.5165245958760293
fber1198.786335099434
fwhmavg4.2969100000000005
fwhmx4.14572
fwhmy4.95795
fwhmz3.78706
icvscsf0.2025345637933541
icvsgm0.40884549560702776
icvswm0.3886199405996182
inumed1.7165184020996094
inurange0.5734661817550657
qi10.0
qi20.012184506507250024
rpvecsf29.148377168438724
rpvegm14.821570775280328
rpvewm18.592189227315302
sizex176
sizey256
sizez256
snrcsf3.4384115424910195
snrgm11.464641860825587
snrtotal12.890932010615968
snrwm23.769742628531297
snrdcsf36.73345487590496
snrdgm86.25551702533471
snrdtotal79.36041291403997
snrdwm115.09226684088026
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk1.9204458708483259
summarybgmad5.692271201059558
summarybgmean14.830807173141354
summarybgmedian14.860653564333916
summarybgn2640698.0
summarybgp053.749040260910988
summarybgp9529.67613796889782
summarybgstdv7.6950388308640925
summarycsfk17.024558587441405
summarycsfmad75.07101195750312
summarycsfmean339.6753456829317
summarycsfmedian319.1652829349041
summarycsfn22763.0
summarycsfp05225.66963912695647
summarycsfp95521.3379251495003
summarycsfstdv92.82142881917787
summarygmk0.3555598129451183
summarygmmad60.940785799578805
summarygmmean750.7005120802663
summarygmmedian749.4466989040375
summarygmn16189.0
summarygmp05646.7320295870304
summarygmp95863.4807596594095
summarygmstdv65.36824794496498
summarywmk0.8426632132234082
summarywmmad38.23866889182362
summarywmmean998.0873632426377
summarywmmedian1000.0000281482935
summarywmn194074.0
summarywmp05925.7419294863939
summarywmp951063.1013443470001
summarywmstdv42.070184243716795
tpmoverlapcsf0.15599781274795532
tpmoverlapgm0.431237131357193
tpmoverlapwm0.49702686071395874
wm2max0.6770578123851683
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime14:25:13.405000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0663917, 0.983114, 0.170523, -0.0305288, 0.168819, -0.985174]
ImageOrientationTextSag>Cor(-4.0)>Tra(1.1)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.027472
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber21
ShimSetting[2611, 5464, -7506, 172, 35, -715, 225, -228]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp223.083
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumfe812096a06ff6302a60caab7f1b6d71
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.